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Publications
Hummel J., Strehmel N., Bölling C., Schmidt S., Walther D., Kopka J. (2013) Mass Spectral Search and Analysis Using the Golm Metabolome Database. In:
The Handbook of Plant Metabolomics
, Wiley-VCH Verlag GmbH & Co. KGaA; 321-343;
http://dx.doi.org/10.1002/9783527669882.ch18
Hummel, J., Strehmel, N., Selbig, J., Walther, D. and Kopka, J. (2010) Decision tree supported substructure prediction of metabolites from GC-MS profiles,
Metabolomics
, online first.
http://dx.doi.org/10.1007/s11306-010-0198-7
Awarded by Metabolomics Society as
2013 Best Paper Runner up
for second highest total number of citations during the previous three years.
Strehmel, N., Hummel, J., Erban, A., Strassburg, K. and Kopka, J. (2008) Retention index thresholds for compound matching in GC-MS metabolite profiling,
Journal of Chromatography B
,
871
, 182-190.
http://dx.doi.org/10.1016/j.jchromb.2008.04.042
Hummel, J., Selbig, J., Walther, D. and Kopka, J. (2007) The Golm Metabolome Database: a database for GC-MS based metabolite profiling. In Nielsen, J. and Jewett, M.C. (eds),
Metabolomics
. Springer-Verlag, Berlin, Heidelberg, New York, 75-96.
http://dx.doi.org/10.1007/4735_2007_0229/
Schauer, N., Steinhauser, D., Strelkov, S., Schomburg, D., Allison, G., Moritz, T., Lundgren, K., Roessner-Tunali, U., Forbes, M.G., Willmitzer, L., Fernie, A.R. and Kopka, J. (2005) GC-MS libraries for the rapid identification of metabolites in complex biological samples,
FEBS letters
,
579
, 1332-1337.
http://dx.doi.org/10.1016/j.febslet.2005.01.029
Kopka, J., Schauer, N., Krueger, S., Birkemeyer, C., Usadel, B., Bergmuller, E., Dormann, P., Weckwerth, W., Gibon, Y., Stitt, M., Willmitzer, L., Fernie, A.R. and Steinhauser, D. (2005) GMD@CSB.DB: the Golm Metabolome Database,
Bioinformatics
,
21
, 1635-1638.
http://dx.doi.org/10.1093/bioinformatics/bti236
Poster
the GMD,
Big Data
in Metabolomics
presented at the
Metabolomics Society 2013 Conference in Glasgow
the GMD, featuring decision-tree-supported substructure prediction of metabolites from GC-MS profiles
presented at the
Metabolomics Society 2012 Conference in Washington, DC
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